BioSenseAI
Simulator mode
ready

The same iPSC → monocyte reactor model the loop optimises, with the knobs in your hands. Every value on this page is derived from one instrument channel of a synthetic stand-in. It is a sandbox for building intuition, not a measurement, and nothing here decides anything.

Process

Conditions

Stage durations · days
Starting culture

day 0 — synthetic stand-in
day 0day 25

Run outcome

Instruments · this day

good
condition score 100

    The read is arithmetic over these channels against stated thresholds. A flag names what a channel says — not what is wrong with the culture. An instrument fault and a failing culture can raise the same one.

    A against B

    Something new against the control

    Runs the conditions above twice: once as the control, once with an effect you assume — how much faster or slower the cells grow, and how much better or worse they differentiate (×1 = no effect). An edited line carries it through the whole process; an added factor (a new cytokine, small molecule or supplement the reactor has no term for) acts only in the stage you give it. The curves are that assumption played through the reactor, labelled as one — not a prediction of what the gene or the factor does.

    How each parameter acts in the model

    Follow a setting to the curve it moves. These are the stand-in model's own equations (the full derivation is in BIOSIMULATOR_MODEL.md); they describe the model, not real cells.

    Carry into a loop run

    Prompt for the console

    open the console

    Every quantity leaves here as a design_choice: a person turned a knob against a synthetic model, and no literature value supports it. The loop carries that provenance, and a design_choice quantity blocks the wet lab until a named reviewer accepts it.